Search results for "Redox gradient"

showing 3 items of 3 documents

Novel Autotrophic Organisms Contribute Significantly to the Internal Carbon Cycling Potential of a Boreal Lake

2018

ABSTRACT Oxygen-stratified lakes are typical for the boreal zone and also a major source of greenhouse gas emissions in the region. Due to shallow light penetration, restricting the growth of phototrophic organisms, and large allochthonous organic carbon inputs from the catchment area, the lake metabolism is expected to be dominated by heterotrophic organisms. In this study, we test this assumption and show that the potential for autotrophic carbon fixation and internal carbon cycling is high throughout the water column. Further, we show that during the summer stratification carbon fixation can exceed respiration in a boreal lake even below the euphotic zone. Metagenome-assembled genomes an…

0301 basic medicine030106 microbiologyHeterotrophDNA RibosomaljärvetMicrobiologyCarbon cycle03 medical and health sciencesWater columnTotal inorganic carbonRNA Ribosomal 16SVirologyCluster AnalysisPhotic zoneAnaerobiosis14. Life underwaterAutotrophFinlandPhylogeny030304 developmental biologyTotal organic carbon0303 health sciencesAutotrophic ProcessesmetagenomicsPhototroph030306 microbiologygreenhouse gas emissionsEcologyhiilen kiertoCarbon fixationSequence Analysis DNAiron oxidizers15. Life on landBiotaCarbonQR1-502Food webLakesMikrobiologi13. Climate actionmikro-organismitredox gradientEnvironmental sciencechemoautotrophyResearch ArticlemBio
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Symmetry Breaking and Establishment of Dorsal/Ventral Polarity in the Early Sea Urchin Embryo

2015

The mechanisms imposing the Dorsal/Ventral (DV) polarity of the early sea urchin embryo consist of a combination of inherited maternal information and inductive interactions among blastomeres. Old and recent studies suggest that a key molecular landmark of DV polarization is the expression of nodal on the future ventral side, in apparent contrast with other metazoan embryos, where nodal is expressed dorsally. A subtle maternally-inherited redox anisotropy, plus some maternal factors such as SoxB1, Univin, and p38-MAPK have been identified as inputs driving the spatially asymmetric transcription of nodal. However, all the mentioned factors are broadly distributed in the embryo as early as no…

Physics and Astronomy (miscellaneous)General MathematicsRepressorNodalSettore BIO/11 - Biologia MolecolareBiologyp38 MAPKsymmetry breakingWntTranscription (biology)Computer Science (miscellaneous)dorsal/ventral axiGenePsychological repressionsea urchin embryodorsal/ventral axishypoxialcsh:Mathematicsdorsal/ventral axis; redox gradient; hypoxia; symmetry breaking; organizing centre; Nodal; Hbox12 transcription repressor; p38 MAPK; Wnt; sea urchin embryoWnt signaling pathwayEmbryoBlastomerelcsh:QA1-939Cell biologyorganizing centreChemistry (miscellaneous)Hbox12 transcription repressorredox gradientNODAL
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Sulfur cycling and methanogenesis primarily drive microbial colonization of the highly sulfidic Urania deep hypersaline basin

2009

Urania basin in the deep Mediterranean Sea houses a lake that is >100 m deep, devoid of oxygen, 6 times more saline than seawater, and has very high levels of methane and particularly sulfide (up to 16 mM), making it among the most sulfidic water bodies on Earth. Along the depth profile there are 2 chemoclines, a steep one with the overlying oxic seawater, and another between anoxic brines of different density, where gradients of salinity, electron donors and acceptors occur. To identify and differentiate the microbes and processes contributing to the turnover of organic matter and sulfide along the water column, these chemoclines were sampled at a high resolution. Bacterial cell numbers…

SalinitySulfideMethanogenesisMolecular Sequence Datageosphere-biosphere interactionchemistry.chemical_elementGEO/01 - PALEONTOLOGIA E PALEOECOLOGIA03 medical and health sciencesWater columnelement cyclingMediterranean SeaSeawater14. Life underwaterEcosystemComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hungerchemistry.chemical_classification[SDU.OCEAN]Sciences of the Universe [physics]/Ocean AtmosphereManganese0303 health sciencesNitratesMultidisciplinaryBacteriabiology030306 microbiologyEcologyWaterdeep anoxic hypersaline lake15. Life on landbiology.organism_classificationArchaeaSulfurAnoxic waters6. Clean waterOxygenRedox gradientchemistryDeep anoxic hypersaline lake; Element cycling; Geosphere-biosphere interaction; Mediterranean Sea; Microbial diversityEnvironmental chemistrymicrobial diversityPhysical SciencesSeawaterdeep anoxic hypersaline lake element cycling geosphere–biosphere interaction Mediterranean Sea microbial diversitySulfurArchaea
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